Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulatory protein, yeht-like | CK234_01866 | Not Available | Positive | 2460716 - 2461489 | 29809.8 |
| hypothetical protein | CK234_01867 | Not Available | Negative | 2461518 - 2461790 | 10520.9 |
| putative bifunctional protein, puta-like | CK234_01868 | Not Available | Negative | 2462042 - 2465476 | 128550.0 |
| hypothetical protein | CK234_01869 | Not Available | Negative | 2465733 - 2466338 | 23278.7 |
| secondary thiamine-phosphate synthase enzyme | CK234_01870 | Not Available | Negative | 2466740 - 2467153 | 15533.7 |
| hypothetical protein | CK234_01871 | Not Available | Negative | 2467162 - 2468364 | 44901.3 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_01872 | Not Available | Negative | 2468361 - 2469005 | 24439.4 |
| protein of unknown function (duf4836) | CK234_01873 | Not Available | Negative | 2469002 - 2470534 | 56148.8 |
| ribosomal rna small subunit methyltransferase e | CK234_01874 | Not Available | Negative | 2470539 - 2471240 | 26175.7 |
| bifunctional nuclease | CK234_01875 | Not Available | Negative | 2471269 - 2471835 | 21270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

