Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | CK234_00155 | Not Available | Positive | 213844 - 214548 | 26375.2 |
| cytochrome bd-i ubiquinol oxidase subunit 2 | CK234_00156 | Not Available | Negative | 214844 - 215989 | 42798.5 |
| cytochrome bd-ii ubiquinol oxidase subunit 1 | CK234_00157 | Not Available | Negative | 216144 - 217646 | 55114.9 |
| protein of unknown function (duf4492) | CK234_00158 | Not Available | Negative | 217670 - 217888 | 8685.8 |
| putative outer membrane efflux protein, bepc precursor-like | CK234_00159 | Not Available | Positive | 218042 - 219385 | 50244.3 |
| putative macrolide export protein, maca-like | CK234_00160 | Not Available | Positive | 219425 - 220633 | 43386.0 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_00161 | Not Available | Positive | 220675 - 221418 | 27195.8 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_00162 | Not Available | Positive | 221437 - 222657 | 44142.1 |
| putative sensor histidine kinase, ypda-like | CK234_00163 | Not Available | Positive | 222851 - 223906 | 40236.2 |
| putative transcriptional regulatory protein, yeht-like | CK234_00164 | Not Available | Positive | 223903 - 224628 | 27866.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

