Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01856 | Not Available | Positive | 2447301 - 2447723 | 16008.7 |
| putative toluene efflux pump periplasmic linker protein, ttga precursor-like | CK234_01857 | Not Available | Positive | 2447846 - 2448997 | 43842.2 |
| putative efflux pump membrane transporter, bepe-like | CK234_01858 | Not Available | Positive | 2449010 - 2452159 | 115634.0 |
| putative outer membrane protein, oprm precursor-like | CK234_01859 | Not Available | Positive | 2452140 - 2453594 | 54730.9 |
| transglycosylase associated protein | CK234_01860 | Not Available | Negative | 2453683 - 2453934 | 8688.23 |
| rnd family efflux transporter, mfp subunit | CK234_01861 | Not Available | Positive | 2454638 - 2455198 | 20438.6 |
| putative multidrug resistance protein, mdtc-like | CK234_01862 | Not Available | Positive | 2455219 - 2456832 | 59060.6 |
| putative nickel and cobalt resistance protein, cnra-like | CK234_01863 | Not Available | Positive | 2456896 - 2458278 | 51300.9 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_01864 | Not Available | Positive | 2458265 - 2459554 | 48530.8 |
| putative sensor histidine kinase, ypda-like | CK234_01865 | Not Available | Positive | 2459695 - 2460723 | 38942.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

