Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CK234_01836 | Not Available | Negative | 2422871 - 2423893 | 39550.8 |
| phytoene desaturase | CK234_01837 | Not Available | Negative | 2423911 - 2425200 | 49661.4 |
| cdp-abequose synthase | CK234_01838 | Not Available | Negative | 2425187 - 2426098 | 34224.1 |
| daunorubicin resistance abc transporter membrane protein | CK234_01839 | Not Available | Negative | 2426948 - 2428138 | 44503.8 |
| abc-2 family transporter protein | CK234_01840 | Not Available | Negative | 2428122 - 2429294 | 43620.6 |
| rnd family efflux transporter, mfp subunit | CK234_01841 | Not Available | Negative | 2429355 - 2430350 | 36927.8 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_01842 | Not Available | Negative | 2430368 - 2431801 | 53881.0 |
| hypothetical protein | CK234_01843 | Not Available | Negative | 2431864 - 2434062 | 86181.9 |
| glutamine synthetase | CK234_01844 | Not Available | Positive | 2434238 - 2436427 | 82847.0 |
| camp receptor protein | CK234_01845 | Not Available | Positive | 2436588 - 2437289 | 26605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

