Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative udp-glc:alpha-d-glcnac-diphosphoundecaprenol beta-1,3-glucosyltransferase, wfgd-like | CK234_01826 | Not Available | Negative | 2413401 - 2414138 | 28781.5 |
| hypothetical protein | CK234_01827 | Not Available | Negative | 2414135 - 2414365 | 8755.61 |
| glycosyl transferase family 2 | CK234_01828 | Not Available | Negative | 2414380 - 2414964 | 22814.5 |
| putative teichuronic acid biosynthesis glycosyltransferase, tuah-like | CK234_01829 | Not Available | Negative | 2414971 - 2416110 | 44256.1 |
| epsg family protein | CK234_01830 | Not Available | Negative | 2416107 - 2417255 | 45514.8 |
| udp-n-acetylglucosamine 2-epimerase | CK234_01831 | Not Available | Negative | 2417252 - 2418394 | 42392.3 |
| putative glycosyltransferase | CK234_01832 | Not Available | Negative | 2418403 - 2419161 | 29060.6 |
| d-inositol 3-phosphate glycosyltransferase | CK234_01833 | Not Available | Negative | 2419169 - 2420416 | 47343.8 |
| hypothetical protein | CK234_01834 | Not Available | Negative | 2420451 - 2421395 | 37714.8 |
| putative o-antigen transporter | CK234_01835 | Not Available | Negative | 2421409 - 2422851 | 53712.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

