Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-dependent glutamate synthase 1 | CK234_01806 | Not Available | Positive | 2392704 - 2397182 | 164877.0 |
| glutamate synthase (nadph) small chain | CK234_01807 | Not Available | Positive | 2397163 - 2398563 | 51239.7 |
| asparagine synthetase b (glutamine-hydrolyzing) | CK234_01808 | Not Available | Positive | 2398580 - 2400250 | 62823.6 |
| putative aaa-atpase | CK234_01809 | Not Available | Positive | 2400260 - 2400775 | 19788.3 |
| hypothetical protein | CK234_01810 | Not Available | Positive | 2400772 - 2400951 | 7280.74 |
| carboxypeptidase regulatory-like domain protein | CK234_01811 | Not Available | Positive | 2401025 - 2401849 | 31853.4 |
| Trna-thr | Not Available | Not Available | Positive | 2401874 - 2401949 | Not Available |
| uvrb-like protein | CK234_01813 | Not Available | Negative | 2402311 - 2404665 | 89062.3 |
| hepn domain protein | CK234_01814 | Not Available | Negative | 2405255 - 2405506 | 9233.18 |
| nucleotidyltransferase domain protein | CK234_01815 | Not Available | Negative | 2405497 - 2405817 | 12470.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

