Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large chain | CK234_01796 | Not Available | Negative | 2376512 - 2379736 | 119651.0 |
| carbamoyl-phosphate synthase small chain | CK234_01797 | Not Available | Negative | 2379760 - 2380836 | 39950.5 |
| amidophosphoribosyltransferase precursor | CK234_01798 | Not Available | Negative | 2380862 - 2382745 | 71341.8 |
| glutamine--fructose-6-phosphate aminotransferase (isomerizing) | CK234_01799 | Not Available | Negative | 2382904 - 2384748 | 67627.3 |
| glutamine synthetase | CK234_01800 | Not Available | Negative | 2385062 - 2387251 | 82007.6 |
| ammonia channel precursor | CK234_01801 | Not Available | Negative | 2387309 - 2388667 | 47652.5 |
| nitrogen regulatory protein p-ii | CK234_01802 | Not Available | Negative | 2388743 - 2389099 | 13455.3 |
| hypothetical protein | CK234_01803 | Not Available | Negative | 2389217 - 2389936 | 25370.4 |
| ll-diaminopimelate aminotransferase | CK234_01804 | Not Available | Negative | 2390061 - 2391290 | 45919.9 |
| diaminopimelate epimerase | CK234_01805 | Not Available | Negative | 2391337 - 2392179 | 30283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

