Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | CK234_01786 | Not Available | Negative | 2364012 - 2364950 | 35502.6 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | CK234_01787 | Not Available | Positive | 2365005 - 2365895 | 31793.7 |
| malonyl coa-acyl carrier protein transacylase | CK234_01788 | Not Available | Positive | 2365905 - 2366909 | 35964.6 |
| putative nte family protein, rssa-like | CK234_01789 | Not Available | Positive | 2367035 - 2367820 | 29317.4 |
| neopullulanase 2 | CK234_01790 | Not Available | Positive | 2367837 - 2369534 | 64741.7 |
| hpaii-like restriction endonuclease | CK234_01791 | Not Available | Negative | 2369663 - 2370751 | 41342.9 |
| choloylglycine hydrolase | CK234_01792 | Not Available | Positive | 2371252 - 2372310 | 39406.4 |
| alanine--trna ligase | CK234_01793 | Not Available | Positive | 2372545 - 2373003 | 17636.3 |
| acid shock protein | CK234_01794 | Not Available | Positive | 2373271 - 2373711 | 16811.8 |
| putative autoinducer 2 sensor kinase/phosphatase, luxq-like | CK234_01795 | Not Available | Negative | 2373952 - 2376297 | 89699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

