Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein, ylma-like | CK234_00145 | Not Available | Positive | 200149 - 201597 | 55117.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CK234_00146 | Not Available | Positive | 201760 - 202692 | 34028.5 |
| sodium/glucose cotransporter | CK234_00147 | Not Available | Positive | 202706 - 204139 | 52090.3 |
| nitronate monooxygenase | CK234_00148 | Not Available | Negative | 204348 - 205298 | 34187.3 |
| putative anaerobic c4-dicarboxylate transporter, dcua-like | CK234_00149 | Not Available | Positive | 205540 - 206838 | 45850.3 |
| putative l-asparaginase periplasmic precursor | CK234_00150 | Not Available | Positive | 207006 - 208064 | 37843.8 |
| porin o- and p-like phosphate-selective protein | CK234_00151 | Not Available | Positive | 208152 - 209321 | 45056.2 |
| putative serine/threonine transporter, sstt-like | CK234_00152 | Not Available | Negative | 209526 - 210704 | 42141.5 |
| 6-phosphogluconate dehydrogenase, nadp(+)-dependent, decarboxylating | CK234_00153 | Not Available | Positive | 210789 - 212225 | 53142.1 |
| glucose-6-phosphate 1-dehydrogenase | CK234_00154 | Not Available | Positive | 212274 - 213782 | 58278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

