Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | CK234_01756 | Not Available | Negative | 2325613 - 2327448 | 68434.3 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01757 | Not Available | Negative | 2327478 - 2330699 | 116972.0 |
| acetylxylan esterase precursor | CK234_01758 | Not Available | Positive | 2330981 - 2332366 | 51198.6 |
| putative sensor histidine kinase, tods-like | CK234_01759 | Not Available | Positive | 2332502 - 2336434 | 149337.0 |
| splicing factor, cc1-like family | CK234_01760 | Not Available | Positive | 2336700 - 2336945 | 9144.0 |
| putative inner membrane protein, yjjp-like | CK234_01761 | Not Available | Negative | 2337045 - 2338391 | 50176.2 |
| serine/threonine-protein kinase | CK234_01762 | Not Available | Positive | 2338541 - 2339182 | 23471.9 |
| ribosomal large subunit pseudouridine synthase d | CK234_01763 | Not Available | Positive | 2339201 - 2340274 | 40774.7 |
| d-alanine--d-alanine ligase | CK234_01764 | Not Available | Positive | 2340271 - 2341245 | 36067.1 |
| hypothetical protein | CK234_01765 | Not Available | Positive | 2341274 - 2342431 | 44510.6 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

