Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_01726 | Not Available | Negative | 2283805 - 2287113 | 123727.0 |
| hypothetical protein | CK234_01727 | Not Available | Negative | 2287140 - 2287334 | 7450.09 |
| putative sensor histidine kinase, tods-like | CK234_01728 | Not Available | Positive | 2287432 - 2291466 | 153331.0 |
| protein of unknown function (duf3810) | CK234_01729 | Not Available | Negative | 2291684 - 2292724 | 40933.9 |
| putative unsaturated rhamnogalacturonyl hydrolase, yter-like | CK234_01730 | Not Available | Negative | 2292866 - 2295181 | 88733.9 |
| bnr repeat-containing family member | CK234_01731 | Not Available | Negative | 2295273 - 2296511 | 47888.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CK234_01732 | Not Available | Negative | 2296970 - 2298268 | 48354.2 |
| dihydropteroate synthase | CK234_01733 | Not Available | Positive | 2298387 - 2299244 | 32039.9 |
| hypothetical protein | CK234_01734 | Not Available | Positive | 2299276 - 2300040 | 28478.5 |
| acetyltransferase (gnat) domain protein | CK234_01735 | Not Available | Negative | 2300118 - 2301128 | 39029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

