Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph-like outer membrane protein | CK234_01706 | Not Available | Negative | 2246891 - 2247505 | 23085.3 |
| hypothetical protein | CK234_01707 | Not Available | Negative | 2247528 - 2247755 | 8190.17 |
| cytosol non-specific dipeptidase | CK234_01708 | Not Available | Positive | 2247977 - 2249434 | 53122.6 |
| hypothetical protein | CK234_01709 | Not Available | Positive | 2249467 - 2250450 | 37110.2 |
| ribosomal rna large subunit methyltransferase h | CK234_01710 | Not Available | Negative | 2250527 - 2251000 | 18383.5 |
| putative nicotinate-nucleotide pyrophosphorylase (carboxylating) | CK234_01711 | Not Available | Positive | 2251081 - 2251932 | 31226.1 |
| putative hth-type transcriptional activator, rhar-like | CK234_01712 | Not Available | Negative | 2252037 - 2254856 | 107456.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01713 | Not Available | Positive | 2255099 - 2258137 | 110977.0 |
| starch-binding associating with outer membrane | CK234_01714 | Not Available | Positive | 2258151 - 2259866 | 63842.8 |
| protein of unknown function (duf4923) | CK234_01715 | Not Available | Positive | 2260072 - 2260668 | 21300.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

