Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01696 | Not Available | Positive | 2237625 - 2238116 | 18785.7 |
| atp phosphoribosyltransferase | CK234_01697 | Not Available | Positive | 2238345 - 2239196 | 31336.4 |
| histidinol dehydrogenase | CK234_01698 | Not Available | Positive | 2239246 - 2240526 | 46572.2 |
| histidinol-phosphate aminotransferase | CK234_01699 | Not Available | Positive | 2240529 - 2241569 | 39610.4 |
| putative histidine biosynthesis bifunctional protein, hisb-like | CK234_01700 | Not Available | Positive | 2241573 - 2242691 | 42299.9 |
| glutamine-dependent nad(+) synthetase | CK234_01701 | Not Available | Negative | 2242781 - 2244745 | 72696.5 |
| putative peroxide-responsive repressor, perr-like | CK234_01702 | Not Available | Positive | 2244871 - 2245281 | 15560.8 |
| reverse rubrerythrin-1 | CK234_01703 | Not Available | Positive | 2245359 - 2245910 | 20566.4 |
| thioredoxin-2 | CK234_01704 | Not Available | Negative | 2246014 - 2246472 | 17034.9 |
| thioredoxin-like protein | CK234_01705 | Not Available | Negative | 2246476 - 2246772 | 11303.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

