Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter permease, yknz-like | CK234_01686 | Not Available | Positive | 2226806 - 2228062 | 47348.6 |
| putative macrolide export atp-binding/permease protein, macb-like | CK234_01687 | Not Available | Positive | 2228100 - 2229320 | 46825.5 |
| putative type i secretion outer membrane protein, tolc family-like | CK234_01688 | Not Available | Positive | 2229474 - 2230958 | 56980.8 |
| putative transcriptional regulatory protein, zrar-like | CK234_01689 | Not Available | Positive | 2231044 - 2232399 | 50734.5 |
| putative sensor protein, zras-like | CK234_01690 | Not Available | Positive | 2232422 - 2233717 | 49038.2 |
| putative aaa-atpase | CK234_01691 | Not Available | Positive | 2233959 - 2234126 | 6488.94 |
| hypothetical protein | CK234_01692 | Not Available | Negative | 2234584 - 2234778 | 7075.7 |
| membrane-bound lytic murein transglycosylase f precursor | CK234_01693 | Not Available | Negative | 2235222 - 2236601 | 52163.3 |
| uridine kinase | CK234_01694 | Not Available | Negative | 2236598 - 2237209 | 23271.3 |
| stress responsive a/b barrel domain protein | CK234_01695 | Not Available | Positive | 2237315 - 2237614 | 11090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

