Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate esterase, sialic acid-specific acetylesterase | CK234_01666 | Not Available | Positive | 2207662 - 2209173 | 57342.3 |
| winged helix dna-binding domain protein | CK234_01667 | Not Available | Negative | 2209240 - 2210292 | 40499.8 |
| cytidine deaminase | CK234_01668 | Not Available | Negative | 2210289 - 2210795 | 18787.5 |
| putative heavy-metal-binding protein | CK234_01669 | Not Available | Positive | 2210988 - 2211311 | 11453.6 |
| protein of unknown function (duf4476) | CK234_01670 | Not Available | Negative | 2211381 - 2211992 | 22983.7 |
| protein of unknown function (duf4476) | CK234_01671 | Not Available | Negative | 2212026 - 2212697 | 25461.8 |
| putative ecf rna polymerase sigma factor, sigw-like | CK234_01672 | Not Available | Positive | 2213005 - 2213541 | 21672.0 |
| hypothetical protein | CK234_01673 | Not Available | Positive | 2213549 - 2213911 | 13745.5 |
| hypothetical protein | CK234_01674 | Not Available | Positive | 2213933 - 2214481 | 21552.6 |
| carbohydrate-binding family 9 | CK234_01675 | Not Available | Positive | 2214637 - 2215278 | 24603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

