Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-inositol 3-phosphate glycosyltransferase | CK234_00135 | Not Available | Positive | 189522 - 190787 | 47628.2 |
| glycosyl hydrolase family 57 | CK234_00136 | Not Available | Positive | 190806 - 192200 | 53209.7 |
| hypothetical protein | CK234_00137 | Not Available | Positive | 192353 - 192718 | 13987.2 |
| biotin synthase | CK234_00138 | Not Available | Positive | 192731 - 193690 | 35544.0 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | CK234_00139 | Not Available | Positive | 193729 - 195000 | 47742.2 |
| 8-amino-7-oxononanoate synthase | CK234_00140 | Not Available | Positive | 195028 - 196179 | 43109.2 |
| protein of unknown function (duf452) | CK234_00141 | Not Available | Positive | 196176 - 196829 | 25130.3 |
| malonyl-(acyl-carrier protein) o-methyltransferase | CK234_00142 | Not Available | Positive | 196811 - 197596 | 30026.4 |
| putative biod-like atp-dependent dethiobiotin synthetase | CK234_00143 | Not Available | Positive | 197611 - 198255 | 24303.0 |
| hypothetical protein | CK234_00144 | Not Available | Negative | 198699 - 199424 | 25761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

