Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain protein | CK234_01656 | Not Available | Negative | 2194836 - 2195513 | 26233.5 |
| sodium/glucose cotransporter | CK234_01657 | Not Available | Negative | 2195589 - 2197331 | 64485.8 |
| aldose 1-epimerase precursor | CK234_01658 | Not Available | Negative | 2197358 - 2198503 | 41635.1 |
| galactokinase | CK234_01659 | Not Available | Negative | 2198709 - 2199863 | 42994.0 |
| l-fucose-proton symporter | CK234_01660 | Not Available | Negative | 2199904 - 2201244 | 47498.5 |
| aldose 1-epimerase precursor | CK234_01661 | Not Available | Negative | 2201291 - 2202385 | 39986.6 |
| folylpolyglutamate synthase | CK234_01662 | Not Available | Negative | 2202480 - 2203766 | 48044.6 |
| putative chaperone protein, dnaj-like | CK234_01663 | Not Available | Negative | 2203861 - 2205036 | 42201.2 |
| putative protein, grpe-like | CK234_01664 | Not Available | Negative | 2205056 - 2205676 | 23521.8 |
| putative abc transporter atp-binding protein, yhes-like | CK234_01665 | Not Available | Positive | 2205854 - 2207473 | 61289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

