Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein, histone-like | CK234_01636 | Not Available | Positive | 2174183 - 2174806 | 23825.8 |
| hypothetical protein | CK234_01637 | Not Available | Positive | 2175180 - 2176580 | 52376.5 |
| hypothetical protein | CK234_01638 | Not Available | Positive | 2176624 - 2178198 | 58672.1 |
| protein of unknown function (duf4421) | CK234_01639 | Not Available | Negative | 2178271 - 2179398 | 43107.2 |
| 1,5-anhydro-d-fructose reductase | CK234_01640 | Not Available | Negative | 2179408 - 2180397 | 36847.1 |
| membrane-bound lytic murein transglycosylase f | CK234_01641 | Not Available | Negative | 2180486 - 2181304 | 31060.2 |
| putative porin | CK234_01642 | Not Available | Negative | 2181313 - 2183424 | 80786.2 |
| putative pyruvate synthase subunit, porc-like | CK234_01643 | Not Available | Negative | 2183518 - 2184060 | 19888.6 |
| putative 2-oxoglutarate oxidoreductase subunit, korb-like | CK234_01644 | Not Available | Negative | 2184074 - 2184838 | 27912.9 |
| hypothetical protein | CK234_01645 | Not Available | Negative | 2184857 - 2185024 | 6434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

