Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthan lyase precursor | CK234_01626 | Not Available | Negative | 2161251 - 2164121 | 106864.0 |
| alpha-1,3-galactosidase b precursor | CK234_01627 | Not Available | Positive | 2164204 - 2166021 | 68960.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CK234_01628 | Not Available | Negative | 2166104 - 2166661 | 21350.4 |
| hypothetical protein | CK234_01629 | Not Available | Negative | 2166672 - 2166920 | 9206.38 |
| 6-phosphofructokinase | CK234_01630 | Not Available | Positive | 2167071 - 2168714 | 59907.0 |
| lysozyme m1 precursor | CK234_01631 | Not Available | Positive | 2168840 - 2169706 | 33936.9 |
| putative inner membrane protein, yccf-like | CK234_01632 | Not Available | Positive | 2169752 - 2170120 | 13206.2 |
| ribosomal protein l11 methyltransferase | CK234_01633 | Not Available | Negative | 2170341 - 2171186 | 31686.9 |
| small redox-active disulfide protein 1 | CK234_01634 | Not Available | Negative | 2171197 - 2171457 | 10400.5 |
| vire n-terminal domain like protein | CK234_01635 | Not Available | Negative | 2171688 - 2173778 | 81474.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

