Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_01616 | Not Available | Negative | 2146324 - 2149545 | 118870.0 |
| hypothetical protein | CK234_01617 | Not Available | Negative | 2150819 - 2150983 | 6222.65 |
| adenylosuccinate synthetase | CK234_01618 | Not Available | Negative | 2151283 - 2152554 | 46850.9 |
| putative peroxide-responsive repressor, perr-like | CK234_01619 | Not Available | Negative | 2152571 - 2153062 | 19166.0 |
| dna alkylation repair enzyme | CK234_01620 | Not Available | Negative | 2153093 - 2153761 | 25716.3 |
| peptidase family m49 | CK234_01621 | Not Available | Negative | 2153770 - 2155782 | 76580.1 |
| melibiose operon regulatory protein | CK234_01622 | Not Available | Negative | 2155888 - 2156355 | 18149.8 |
| putative atp-dependent dna helicase, recq-like | CK234_01623 | Not Available | Positive | 2156687 - 2158504 | 69144.0 |
| putative radical sam protein, ygiq-like | CK234_01624 | Not Available | Negative | 2158906 - 2160792 | 72051.8 |
| hypothetical protein | CK234_01625 | Not Available | Negative | 2160843 - 2161160 | 12230.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

