Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein, yhes-like | CK234_01606 | Not Available | Negative | 2130369 - 2132312 | 73678.4 |
| hypothetical protein | CK234_01607 | Not Available | Negative | 2132709 - 2134385 | 63045.8 |
| susd family protein | CK234_01608 | Not Available | Negative | 2134403 - 2136091 | 64144.1 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01609 | Not Available | Negative | 2136105 - 2139425 | 122257.0 |
| protein of unknown function (duf4974) | CK234_01610 | Not Available | Negative | 2139675 - 2140688 | 39115.7 |
| putative ecf rna polymerase sigma factor, sigl-like | CK234_01611 | Not Available | Negative | 2140759 - 2141349 | 23285.1 |
| hypothetical protein | CK234_01612 | Not Available | Negative | 2141524 - 2141733 | 8062.96 |
| putative rhamnogalacturonan acetylesterase, rhgt-like | CK234_01613 | Not Available | Negative | 2141983 - 2143074 | 40763.0 |
| gdsl-like lipase/acylhydrolase family protein | CK234_01614 | Not Available | Negative | 2143342 - 2144193 | 32546.0 |
| starch-binding associating with outer membrane | CK234_01615 | Not Available | Negative | 2144794 - 2146302 | 57025.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

