Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative iron(3+)-hydroxamate import atp-binding protein, fhuc-like | CK234_01586 | Not Available | Positive | 2100858 - 2101865 | 37114.8 |
| threonine synthase | CK234_01587 | Not Available | Negative | 2102441 - 2103742 | 47608.8 |
| putative homoserine kinase | CK234_01588 | Not Available | Negative | 2103833 - 2105044 | 44527.4 |
| bifunctional aspartokinase/homoserine dehydrogenase 1 | CK234_01589 | Not Available | Negative | 2105049 - 2107481 | 88655.7 |
| putative rada-like dna repair protein | CK234_01590 | Not Available | Positive | 2108009 - 2109376 | 49904.5 |
| protein of unknown function (duf1847) | CK234_01591 | Not Available | Positive | 2109416 - 2110066 | 24388.4 |
| flavoprotein | CK234_01592 | Not Available | Positive | 2110072 - 2111715 | 60702.7 |
| putative oxygen regulatory protein, nrec-like | CK234_01593 | Not Available | Positive | 2111843 - 2112463 | 23357.5 |
| pesticin receptor precursor | CK234_01594 | Not Available | Positive | 2112633 - 2115059 | 92194.1 |
| hypothetical protein | CK234_01595 | Not Available | Negative | 2115299 - 2116261 | 36802.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

