Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phea-like prephenate biosynthesis protein | CK234_01576 | Not Available | Positive | 2089867 - 2090709 | 31718.1 |
| ll-diaminopimelate aminotransferase | CK234_01577 | Not Available | Positive | 2090684 - 2091868 | 45052.1 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | CK234_01578 | Not Available | Positive | 2091888 - 2092955 | 39929.6 |
| tyra-like l-tyrosine/prephenate biosynthesis protein | CK234_01579 | Not Available | Positive | 2092960 - 2093733 | 29390.4 |
| hypothetical protein | CK234_01580 | Not Available | Negative | 2093796 - 2093969 | 6243.74 |
| exosortase a system-associated hydrolase 1 | CK234_01581 | Not Available | Negative | 2093971 - 2094873 | 31132.9 |
| tonb-dependent vitamin b12 receptor | CK234_01582 | Not Available | Positive | 2095428 - 2097449 | 76078.0 |
| hypothetical protein | CK234_01583 | Not Available | Positive | 2097483 - 2098571 | 41380.2 |
| periplasmic binding protein | CK234_01584 | Not Available | Positive | 2098575 - 2099711 | 42104.2 |
| putative vitamin b12 import system permease protein, btuc-like | CK234_01585 | Not Available | Positive | 2099827 - 2100858 | 36139.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

