Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | CK234_01566 | Not Available | Positive | 2076471 - 2077862 | 51737.2 |
| aminopeptidase e | CK234_01567 | Not Available | Positive | 2077855 - 2079102 | 47302.1 |
| putative single-stranded-dna-specific exonuclease, recj-like | CK234_01568 | Not Available | Positive | 2079217 - 2080989 | 66543.5 |
| putative atp-dependent dna helicase, recq-like | CK234_01569 | Not Available | Positive | 2081107 - 2083002 | 72894.9 |
| o-glcnacase precursor | CK234_01570 | Not Available | Positive | 2083058 - 2085262 | 84541.7 |
| putative tpr repeat-containing protein, yrrb-like | CK234_01571 | Not Available | Positive | 2085277 - 2086227 | 35774.7 |
| putative sporulation integral membrane protein, ytvi-like | CK234_01572 | Not Available | Positive | 2086287 - 2087288 | 36988.0 |
| putative cystathionine beta-lyase, patb-like | CK234_01573 | Not Available | Negative | 2087289 - 2088464 | 44742.1 |
| putative intracellular protease, pfpi family-like | CK234_01574 | Not Available | Negative | 2088533 - 2089063 | 18954.9 |
| putative hth-type transcriptional activator, hxlr-like | CK234_01575 | Not Available | Positive | 2089253 - 2089609 | 13384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

