Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase | CK234_00125 | Not Available | Negative | 176826 - 179039 | 84511.3 |
| protein of unknown function (duf4301) | CK234_00126 | Not Available | Positive | 179183 - 180700 | 56797.3 |
| peptide-n-glycosidase f, n terminal | CK234_00127 | Not Available | Positive | 180820 - 182070 | 46696.9 |
| dna alkylation repair enzyme | CK234_00128 | Not Available | Negative | 182175 - 182891 | 28303.2 |
| putative pai 1-likeprotease synthase | CK234_00129 | Not Available | Negative | 182912 - 183409 | 19247.4 |
| transcriptional regulator, acidobacterial, padr-family | CK234_00130 | Not Available | Positive | 183586 - 183912 | 12456.0 |
| phage shock protein c | CK234_00131 | Not Available | Positive | 183925 - 184971 | 38246.6 |
| phosphoribosylglycinamide formyltransferase 2 | CK234_00132 | Not Available | Positive | 185069 - 186238 | 42895.6 |
| rhomboid family glygly-cterm serine protease | CK234_00133 | Not Available | Negative | 186721 - 187416 | 26534.5 |
| putative glycogen debranching enzyme, archaeal type | CK234_00134 | Not Available | Positive | 187567 - 189507 | 74889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

