Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine-dna glycosylase | CK234_01556 | Not Available | Positive | 2069576 - 2070169 | 23030.2 |
| Trna-trp | Not Available | Not Available | Positive | 2070237 - 2070312 | Not Available |
| 7-carboxy-7-deazaguanine synthase | CK234_01558 | Not Available | Negative | 2070369 - 2070914 | 20479.5 |
| 6-carboxy-5,6,7,8-tetrahydropterin synthase | CK234_01559 | Not Available | Negative | 2070901 - 2071233 | 12835.3 |
| putative inner membrane protein, yban-like | CK234_01560 | Not Available | Positive | 2071269 - 2071730 | 18212.0 |
| hypothetical protein | CK234_01561 | Not Available | Positive | 2071861 - 2072196 | 13578.6 |
| putative cell division protein, zapa-like | CK234_01562 | Not Available | Positive | 2072226 - 2072519 | 11772.0 |
| ribonuclease y | CK234_01563 | Not Available | Positive | 2072620 - 2074155 | 57327.7 |
| hypothetical protein | CK234_01564 | Not Available | Positive | 2074347 - 2075147 | 30056.0 |
| putative nte family protein, rssa-like | CK234_01565 | Not Available | Negative | 2075287 - 2076141 | 32936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

