Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein, histone-like | CK234_01546 | Not Available | Positive | 2055624 - 2056256 | 23797.4 |
| Trna-ser | Not Available | Not Available | Positive | 2056531 - 2056618 | Not Available |
| ysirk-targeted surface antigen transcriptional regulator | CK234_01548 | Not Available | Positive | 2056751 - 2058502 | 68523.8 |
| putative thiol:disulfide interchange protein, dsbd precursor-like | CK234_01549 | Not Available | Positive | 2058635 - 2060668 | 74765.9 |
| serine dehydratase alpha chain | CK234_01550 | Not Available | Positive | 2060860 - 2062155 | 46076.9 |
| gcn5-related n-acetyl-transferase | CK234_01551 | Not Available | Negative | 2062230 - 2062508 | 10514.7 |
| putative sensor histidine kinase, tmos-like | CK234_01552 | Not Available | Negative | 2062656 - 2066615 | 149531.0 |
| putative dna-binding domain protein | CK234_01553 | Not Available | Positive | 2066748 - 2067395 | 24812.1 |
| putative amino-acid carrier protein, alst-like | CK234_01554 | Not Available | Positive | 2067401 - 2068801 | 51072.4 |
| hypothetical protein | CK234_01555 | Not Available | Positive | 2068935 - 2069561 | 24320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

