Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | CK234_01536 | Not Available | Negative | 2042258 - 2043340 | 39549.0 |
| putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase | CK234_01537 | Not Available | Positive | 2043499 - 2044281 | 28741.5 |
| putative alpha-1,2-mannosidase | CK234_01538 | Not Available | Positive | 2044485 - 2046677 | 82242.1 |
| hypothetical protein | CK234_01539 | Not Available | Positive | 2046870 - 2047073 | 7572.18 |
| hypothetical protein | CK234_01540 | Not Available | Negative | 2047070 - 2047717 | 24707.7 |
| hypothetical protein | CK234_01541 | Not Available | Negative | 2047802 - 2048527 | 26605.6 |
| susd family protein | CK234_01542 | Not Available | Negative | 2048540 - 2050525 | 76453.4 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01543 | Not Available | Negative | 2050538 - 2053822 | 121522.0 |
| protein of unknown function (duf3874) | CK234_01544 | Not Available | Negative | 2054159 - 2055310 | 45212.5 |
| hypothetical protein | CK234_01545 | Not Available | Negative | 2055416 - 2055622 | 7958.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

