Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein 69 | CK234_01526 | Not Available | Positive | 2027956 - 2029338 | 52411.6 |
| putative electron transport protein, yccm-like | CK234_01527 | Not Available | Positive | 2029374 - 2030900 | 55328.3 |
| protein of unknown function (duf1893) | CK234_01528 | Not Available | Positive | 2030918 - 2031337 | 15717.2 |
| cupin domain protein | CK234_01529 | Not Available | Positive | 2031515 - 2032069 | 20522.8 |
| acetyl-coenzyme a synthetase | CK234_01530 | Not Available | Positive | 2032153 - 2033805 | 62298.4 |
| dihydro-orotase-like protein | CK234_01531 | Not Available | Positive | 2033850 - 2034314 | 17313.7 |
| susd and ragb-like outer membrane lipoprotein | CK234_01532 | Not Available | Negative | 2034626 - 2036596 | 74011.3 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01533 | Not Available | Negative | 2036618 - 2039773 | 114886.0 |
| n-acetylornithine carbamoyltransferase | CK234_01534 | Not Available | Negative | 2039982 - 2040947 | 36475.8 |
| gamma-glutamyl phosphate reductase | CK234_01535 | Not Available | Negative | 2040967 - 2042220 | 45553.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

