Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01516 | Not Available | Positive | 2012388 - 2012909 | 20217.3 |
| putative hth-type transcriptional regulator, yess-like | CK234_01517 | Not Available | Positive | 2012952 - 2013278 | 12460.1 |
| putative glucuronoxylanase, xync precursor-like | CK234_01518 | Not Available | Positive | 2013611 - 2015125 | 55678.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01519 | Not Available | Positive | 2015955 - 2018984 | 110554.0 |
| susd family protein | CK234_01520 | Not Available | Positive | 2019011 - 2020777 | 67710.5 |
| putative arylsulfate sulfotransferase, asst precursor-like | CK234_01521 | Not Available | Positive | 2020979 - 2022778 | 68303.1 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | CK234_01522 | Not Available | Positive | 2022892 - 2024070 | 44114.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | CK234_01523 | Not Available | Positive | 2024228 - 2025130 | 33013.7 |
| sodium/glucose cotransporter | CK234_01524 | Not Available | Positive | 2025148 - 2027031 | 70822.6 |
| hypothetical protein | CK234_01525 | Not Available | Negative | 2027423 - 2027719 | 11172.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

