Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase | CK234_01506 | Not Available | Negative | 2001683 - 2002492 | 30243.6 |
| l-rhamnose-proton symporter | CK234_01507 | Not Available | Negative | 2002578 - 2003597 | 36101.1 |
| l-rhamnose isomerase | CK234_01508 | Not Available | Negative | 2003690 - 2004943 | 47405.2 |
| rhamnulokinase | CK234_01509 | Not Available | Negative | 2004986 - 2006464 | 55045.9 |
| arginine repressor | CK234_01510 | Not Available | Positive | 2006771 - 2007247 | 17529.3 |
| hypothetical protein | CK234_01511 | Not Available | Positive | 2007270 - 2007827 | 20661.0 |
| argininosuccinate synthase | CK234_01512 | Not Available | Positive | 2007928 - 2009136 | 45126.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | CK234_01513 | Not Available | Positive | 2009142 - 2010110 | 35898.3 |
| acetylornithine/acetyl-lysine aminotransferase | CK234_01514 | Not Available | Positive | 2010124 - 2011248 | 40936.8 |
| pyrroline-5-carboxylate reductase | CK234_01515 | Not Available | Positive | 2011432 - 2012205 | 27247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

