Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-dependent dna helicase recg c-terminal | CK234_01496 | Not Available | Negative | 1981964 - 1983430 | 56105.0 |
| beta-galactosidase | CK234_01497 | Not Available | Negative | 1984016 - 1987111 | 117529.0 |
| cyclic nucleotide-gated potassium channel | CK234_01498 | Not Available | Positive | 1987227 - 1988084 | 32682.8 |
| membrane-bound lytic murein transglycosylase d precursor | CK234_01499 | Not Available | Negative | 1988110 - 1989108 | 37375.8 |
| putative hth-type transcriptional activator, rhas-like | CK234_01500 | Not Available | Negative | 1989116 - 1990036 | 35143.8 |
| putative sensor histidine kinase, tods-like | CK234_01501 | Not Available | Positive | 1990185 - 1994345 | 157886.0 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01502 | Not Available | Positive | 1994486 - 1997557 | 114432.0 |
| susd family protein | CK234_01503 | Not Available | Positive | 1997569 - 1999188 | 59890.2 |
| right handed beta helix region | CK234_01504 | Not Available | Positive | 1999357 - 2000871 | 55846.1 |
| protein of unknown function (duf4251) | CK234_01505 | Not Available | Negative | 2000977 - 2001474 | 18510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

