Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01486 | Not Available | Positive | 1968031 - 1968213 | 7189.87 |
| ferrienterobactin receptor precursor | CK234_01487 | Not Available | Positive | 1968309 - 1971710 | 124973.0 |
| susd and ragb-like outer membrane lipoprotein | CK234_01488 | Not Available | Positive | 1971734 - 1973503 | 66868.9 |
| endonuclease/exonuclease/phosphatase family protein | CK234_01489 | Not Available | Positive | 1973547 - 1974392 | 31962.9 |
| retaining alpha-galactosidase precursor | CK234_01490 | Not Available | Positive | 1974580 - 1976595 | 75845.2 |
| ampg-like permease | CK234_01491 | Not Available | Positive | 1976719 - 1978017 | 47974.8 |
| beta-1,4-mannooligosaccharide phosphorylase | CK234_01492 | Not Available | Positive | 1978050 - 1979051 | 37625.8 |
| putative family 109 glycosyl hydrolase | CK234_01493 | Not Available | Positive | 1979510 - 1980751 | 47387.7 |
| hypothetical protein | CK234_01494 | Not Available | Negative | 1981164 - 1981445 | 11177.3 |
| very short patch repair protein | CK234_01495 | Not Available | Negative | 1981405 - 1981908 | 20120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

