Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | CK234_01466 | Not Available | Positive | 1944870 - 1945508 | 24077.7 |
| protein of unknown function (duf4296) | CK234_01467 | Not Available | Positive | 1945512 - 1946486 | 37267.1 |
| hypothetical protein | CK234_01468 | Not Available | Positive | 1946502 - 1946825 | 12222.7 |
| alpha-galactosidase a precursor | CK234_01469 | Not Available | Positive | 1947251 - 1948858 | 60421.4 |
| putative oxygen regulatory protein, nrec-like | CK234_01470 | Not Available | Positive | 1948909 - 1949679 | 29509.5 |
| hypothetical protein | CK234_01471 | Not Available | Negative | 1949697 - 1950281 | 22907.3 |
| putative multidrug resistance protein, mdtk-like | CK234_01472 | Not Available | Negative | 1950396 - 1951688 | 48449.7 |
| hypothetical protein | CK234_01473 | Not Available | Negative | 1951903 - 1952742 | 32319.1 |
| leucyl/phenylalanyl-trna--protein transferase | CK234_01474 | Not Available | Negative | 1952883 - 1953536 | 24969.1 |
| putative atp-dependent clp protease atp-binding subunit, clpa-like | CK234_01475 | Not Available | Negative | 1953632 - 1955860 | 83032.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

