Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf5017) | CK234_00115 | Not Available | Positive | 166337 - 168229 | 69713.6 |
| putative transposase or invertase | CK234_00116 | Not Available | Positive | 168627 - 169484 | 33170.7 |
| 30s ribosomal protein s16 | CK234_00117 | Not Available | Negative | 169559 - 170110 | 19788.4 |
| ferritin | CK234_00118 | Not Available | Positive | 170317 - 170799 | 17891.2 |
| acetylxylan esterase precursor | CK234_00119 | Not Available | Negative | 171245 - 172090 | 30934.9 |
| putative oligopeptide transporter, opt family | CK234_00120 | Not Available | Negative | 172124 - 174115 | 70043.7 |
| hypothetical protein | CK234_00121 | Not Available | Negative | 174201 - 174962 | 30020.0 |
| putative 3',5'-cyclic adenosine monophosphate phosphodiesterase, cpda-like | CK234_00122 | Not Available | Negative | 174928 - 175734 | 31228.2 |
| protein of unknown function (duf1573) | CK234_00123 | Not Available | Negative | 175943 - 176356 | 14899.0 |
| undecaprenol kinase | CK234_00124 | Not Available | Negative | 176451 - 176804 | 12967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

