Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4373) | CK234_01456 | Not Available | Positive | 1931162 - 1931992 | 31690.7 |
| putative na(+)/h(+) antiporter, nhac-like | CK234_01457 | Not Available | Negative | 1932169 - 1933473 | 46607.5 |
| altronate dehydratase | CK234_01458 | Not Available | Negative | 1933619 - 1935109 | 54186.1 |
| putative hth-type transcriptional regulator, dega-like | CK234_01459 | Not Available | Negative | 1935131 - 1936204 | 41159.5 |
| 2-dehydro-3-deoxygluconokinase | CK234_01460 | Not Available | Positive | 1936448 - 1937470 | 37020.8 |
| khg/kdpg aldolase | CK234_01461 | Not Available | Positive | 1937580 - 1938254 | 23919.2 |
| putative metalloprotease, loip precursor-like | CK234_01462 | Not Available | Positive | 1938508 - 1939326 | 29750.7 |
| putative bifunctional transcriptional activator/dna repair enzyme, adaa-like | CK234_01463 | Not Available | Positive | 1939826 - 1940659 | 32094.1 |
| isoleucine--trna ligase | CK234_01464 | Not Available | Positive | 1940868 - 1944356 | 132205.0 |
| general stress protein 16o | CK234_01465 | Not Available | Positive | 1944380 - 1944760 | 14347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

