Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spore coat assembly protein, safa-like | CK234_01446 | Not Available | Negative | 1918860 - 1920668 | 68546.0 |
| uvra-like protein | CK234_01447 | Not Available | Positive | 1920823 - 1923651 | 105933.0 |
| ybak-like cys-trna(pro)/cys-trna(cys) deacylase | CK234_01448 | Not Available | Positive | 1923666 - 1924151 | 17802.8 |
| dipeptide and tripeptide permease a | CK234_01449 | Not Available | Positive | 1924258 - 1925919 | 59851.2 |
| putative lysine exporter, lyso-like | CK234_01450 | Not Available | Negative | 1925982 - 1926602 | 22330.3 |
| putative lysine exporter, lyso-like | CK234_01451 | Not Available | Negative | 1926599 - 1926877 | 10143.0 |
| hypothetical protein | CK234_01452 | Not Available | Positive | 1927643 - 1927822 | 7076.62 |
| very short patch repair protein | CK234_01453 | Not Available | Positive | 1927806 - 1928321 | 20459.9 |
| type-2 restriction enzyme ecorii | CK234_01454 | Not Available | Negative | 1928323 - 1929513 | 46051.6 |
| dna-cytosine methyltransferase | CK234_01455 | Not Available | Negative | 1929519 - 1930814 | 49368.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

