Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | CK234_01436 | Not Available | Positive | 1907930 - 1909108 | 44739.9 |
| putative nte family protein, rssa-like | CK234_01437 | Not Available | Negative | 1909091 - 1911301 | 81937.5 |
| polc-type dna polymerase iii | CK234_01438 | Not Available | Positive | 1911509 - 1911997 | 18589.9 |
| putative impact family member, yigz-like | CK234_01439 | Not Available | Positive | 1912031 - 1912633 | 22823.7 |
| porin o- and p-like phosphate-selective protein | CK234_01440 | Not Available | Positive | 1912824 - 1913837 | 38665.0 |
| uvrb-like protein | CK234_01441 | Not Available | Negative | 1914004 - 1916037 | 77715.7 |
| putative outer membrane assembly lipoprotein, yfio-like | CK234_01442 | Not Available | Positive | 1916203 - 1917039 | 32450.3 |
| rpb6-like rna polymerase | CK234_01443 | Not Available | Positive | 1917056 - 1917391 | 12965.3 |
| protein of unknown function (duf4293) | CK234_01444 | Not Available | Positive | 1917641 - 1918093 | 16883.5 |
| outer membrane protein beta-barrel domain protein | CK234_01445 | Not Available | Negative | 1918177 - 1918860 | 25699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

