Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octanoyltransferase | CK234_01426 | Not Available | Positive | 1899618 - 1900706 | 40837.7 |
| long-chain-fatty-acid--coa ligase | CK234_01427 | Not Available | Negative | 1900916 - 1902580 | 62496.0 |
| putative beta-lactamase-inhibitor-like, pepsy-like | CK234_01428 | Not Available | Negative | 1902792 - 1903274 | 18372.9 |
| hypothetical protein | CK234_01429 | Not Available | Positive | 1903520 - 1903834 | 11474.2 |
| hypothetical protein | CK234_01430 | Not Available | Positive | 1904003 - 1904212 | 7947.52 |
| hypothetical protein | CK234_01431 | Not Available | Negative | 1904468 - 1904641 | 6619.87 |
| Trna-ala | Not Available | Not Available | Positive | 1904866 - 1904939 | Not Available |
| protein of unknown function (duf4286) | CK234_01433 | Not Available | Positive | 1905002 - 1905307 | 11925.3 |
| putative crossover junction endodeoxyribonuclease, ruvc-like | CK234_01434 | Not Available | Positive | 1905304 - 1905873 | 21117.3 |
| pullulanase precursor | CK234_01435 | Not Available | Positive | 1905878 - 1907872 | 74625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

