Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01376 | Not Available | Negative | 1837434 - 1837646 | 8188.45 |
| hypothetical protein | CK234_01377 | Not Available | Negative | 1837621 - 1838028 | 15700.3 |
| hypothetical protein | CK234_01378 | Not Available | Negative | 1837967 - 1839055 | 40851.6 |
| hypothetical protein | CK234_01379 | Not Available | Negative | 1839085 - 1839543 | 17855.5 |
| glycosyl hydrolase family 65, n-terminal domain | CK234_01380 | Not Available | Positive | 1840146 - 1842605 | 91860.4 |
| putative iron-sulfur cluster repair protein, ytfe-like | CK234_01381 | Not Available | Negative | 1842685 - 1843416 | 27847.1 |
| hydroxylamine reductase | CK234_01382 | Not Available | Negative | 1843428 - 1845086 | 61181.4 |
| camp-activated global transcriptional regulator crp | CK234_01383 | Not Available | Positive | 1845201 - 1845791 | 22019.1 |
| arylsulfatase precursor | CK234_01384 | Not Available | Negative | 1846072 - 1847619 | 56965.6 |
| nigd-like c-terminal beta sandwich domain protein | CK234_01385 | Not Available | Positive | 1848111 - 1848848 | 27691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

