Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | CK234_01366 | Not Available | Negative | 1827589 - 1829295 | 65203.1 |
| hypothetical protein | CK234_01367 | Not Available | Positive | 1829714 - 1830316 | 23546.8 |
| putative antilisterial bacteriocin subtilosin biosynthesis protein, alba-like | CK234_01368 | Not Available | Positive | 1830313 - 1830735 | 14643.9 |
| putative coenzyme pqq biosynthesis enzyme, pqqe-like | CK234_01369 | Not Available | Positive | 1830779 - 1831303 | 20050.0 |
| hypothetical protein | CK234_01370 | Not Available | Positive | 1831290 - 1832843 | 61132.0 |
| hypothetical protein | CK234_01371 | Not Available | Positive | 1833281 - 1833454 | 6811.68 |
| subtilisin dy | CK234_01372 | Not Available | Positive | 1833924 - 1834967 | 38598.8 |
| aspartyl protease | CK234_01373 | Not Available | Positive | 1834985 - 1836214 | 46329.1 |
| hypothetical protein | CK234_01374 | Not Available | Negative | 1836370 - 1836747 | 14334.0 |
| hypothetical protein | CK234_01375 | Not Available | Positive | 1837248 - 1837505 | 9874.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

