Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rhamnogalacturonan acetylesterase, rhgt-like | CK234_01336 | Not Available | Positive | 1792039 - 1793313 | 47822.3 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_01337 | Not Available | Positive | 1793331 - 1794815 | 54948.4 |
| protein of unknown function (duf4450) | CK234_01338 | Not Available | Positive | 1794793 - 1795491 | 25996.3 |
| hypothetical protein | CK234_01339 | Not Available | Positive | 1795488 - 1796291 | 30936.2 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_01340 | Not Available | Positive | 1796307 - 1797731 | 52217.9 |
| alpha-l-rhamnosidase | CK234_01341 | Not Available | Positive | 1797748 - 1800507 | 104010.0 |
| isoaspartyl peptidase precursor | CK234_01342 | Not Available | Negative | 1801455 - 1802441 | 34958.3 |
| hypothetical protein | CK234_01343 | Not Available | Negative | 1802734 - 1802898 | 6798.45 |
| l-fucose mutarotase | CK234_01344 | Not Available | Negative | 1803150 - 1803539 | 15271.5 |
| glucokinase | CK234_01345 | Not Available | Negative | 1803539 - 1804510 | 34315.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

