Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CK234_01306 | Not Available | Negative | 1730569 - 1732809 | 84250.7 |
| pectate lyase, pela/pel-15e family | CK234_01307 | Not Available | Negative | 1732818 - 1734326 | 57108.4 |
| starch-binding associating with outer membrane | CK234_01308 | Not Available | Negative | 1734419 - 1736296 | 70189.5 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01309 | Not Available | Negative | 1736315 - 1739854 | 130848.0 |
| protein of unknown function (duf4974) | CK234_01310 | Not Available | Negative | 1739972 - 1740991 | 39133.9 |
| ecf rna polymerase sigma-e factor | CK234_01311 | Not Available | Positive | 1741128 - 1741709 | 23075.8 |
| hypothetical protein | CK234_01312 | Not Available | Negative | 1742425 - 1742808 | 14670.7 |
| hypothetical protein | CK234_01313 | Not Available | Positive | 1743352 - 1743633 | 10934.0 |
| hypothetical protein | CK234_01314 | Not Available | Negative | 1744095 - 1744382 | 10825.5 |
| putative aaa-atpase | CK234_01315 | Not Available | Positive | 1744854 - 1746188 | 52246.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

