Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endonuclease, yhcr precursor-like | CK234_01296 | Not Available | Negative | 1714485 - 1715264 | 27882.5 |
| 50s ribosomal protein l19 | CK234_01297 | Not Available | Positive | 1715462 - 1715815 | 13130.2 |
| hypothetical protein | CK234_01298 | Not Available | Positive | 1715970 - 1716188 | 7895.11 |
| putative sensor histidine kinase, tmos-like | CK234_01299 | Not Available | Negative | 1716270 - 1720556 | 162886.0 |
| l-rhamnose mutarotase | CK234_01300 | Not Available | Negative | 1720637 - 1720951 | 12242.6 |
| putative unsaturated rhamnogalacturonyl hydrolase, yter-like | CK234_01301 | Not Available | Negative | 1720989 - 1722404 | 53304.9 |
| putative rhamnogalacturonan endolyase, yesw precursor-like | CK234_01302 | Not Available | Negative | 1722417 - 1724324 | 70729.5 |
| exo-poly-alpha-d-galacturonosidase precursor | CK234_01303 | Not Available | Negative | 1724321 - 1725709 | 52077.7 |
| glycosyl hydrolase family 115 | CK234_01304 | Not Available | Negative | 1725773 - 1728124 | 89513.1 |
| hypothetical protein | CK234_01305 | Not Available | Negative | 1728396 - 1730513 | 80941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

