Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | CK234_01276 | Not Available | Positive | 1691520 - 1692458 | 33639.6 |
| glycerol kinase | CK234_01277 | Not Available | Positive | 1692484 - 1693980 | 55251.4 |
| l-fucose isomerase, c-terminal domain | CK234_01278 | Not Available | Positive | 1694014 - 1695438 | 52318.8 |
| ureide permease | CK234_01279 | Not Available | Positive | 1695451 - 1696467 | 36037.9 |
| d-allose-binding periplasmic protein precursor | CK234_01280 | Not Available | Positive | 1696505 - 1697323 | 30073.4 |
| histidine--trna ligase | CK234_01281 | Not Available | Positive | 1697482 - 1698846 | 50299.7 |
| hypothetical protein | CK234_01282 | Not Available | Positive | 1698972 - 1699145 | 6879.48 |
| crispr-associated helicase cas3 | CK234_01283 | Not Available | Positive | 1699248 - 1701473 | 84283.9 |
| putative bro family, n-terminal domain protein | CK234_01284 | Not Available | Positive | 1701484 - 1702344 | 33244.5 |
| cas5-like crispr-associated protein | CK234_01285 | Not Available | Positive | 1702346 - 1703026 | 26782.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

