Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 63 c-terminal domain protein | CK234_01266 | Not Available | Positive | 1674520 - 1675902 | 53221.9 |
| putative rna polymerase sigma factor, cnrh-like | CK234_01267 | Not Available | Positive | 1675905 - 1676507 | 23598.8 |
| protein of unknown function (duf4974) | CK234_01268 | Not Available | Positive | 1676572 - 1677558 | 38382.9 |
| tonb-linked outer membrane protein, susc/raga family | CK234_01269 | Not Available | Positive | 1677587 - 1680856 | 122349.0 |
| susd family protein | CK234_01270 | Not Available | Positive | 1680876 - 1682573 | 64613.3 |
| putative sensor histidine kinase, tods-like | CK234_01271 | Not Available | Positive | 1682749 - 1687071 | 165108.0 |
| protein of unknown function (duf5060) | CK234_01272 | Not Available | Positive | 1687236 - 1688840 | 61912.9 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | CK234_01273 | Not Available | Positive | 1688962 - 1689576 | 22216.8 |
| glucitol operon repressor | CK234_01274 | Not Available | Positive | 1689588 - 1690343 | 27350.1 |
| transketolase | CK234_01275 | Not Available | Positive | 1690685 - 1691530 | 31469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

