Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial alpha-l-rhamnosidase 6 hairpin glycosidase domain protein | CK234_00095 | Not Available | Positive | 134613 - 137369 | 104292.0 |
| polygalacturonase | CK234_00096 | Not Available | Positive | 137427 - 138767 | 49800.1 |
| hypothetical protein | CK234_00097 | Not Available | Positive | 138776 - 140116 | 49757.6 |
| putative aerobic respiration control sensor protein, arcb-like | CK234_00098 | Not Available | Negative | 140579 - 143716 | 119522.0 |
| putative 4-hydroxyphenylacetate catabolism regulatory protein, hpaa-like | CK234_00099 | Not Available | Positive | 144045 - 144881 | 32643.4 |
| putative inner membrane protein, ykgb-like | CK234_00100 | Not Available | Positive | 144977 - 145564 | 21136.2 |
| putative degp-like precursor periplasmic serine endoprotease | CK234_00101 | Not Available | Positive | 145886 - 147409 | 53839.6 |
| putative rna polymerase sigma factor, siga-like | CK234_00102 | Not Available | Positive | 147649 - 148509 | 32805.3 |
| hypothetical protein | CK234_00103 | Not Available | Positive | 148731 - 149126 | 15100.5 |
| clostripain family protein | CK234_00104 | Not Available | Positive | 149137 - 150399 | 46854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

