Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulatory protein, zrar-like | CK234_01256 | Not Available | Negative | 1656134 - 1657516 | 51210.5 |
| putative sensory/regulatory protein, rpfc-like | CK234_01257 | Not Available | Negative | 1657618 - 1660185 | 96976.4 |
| putative multidrug resistance protein, mdtk-like | CK234_01258 | Not Available | Negative | 1660199 - 1661509 | 48569.2 |
| putative coenzyme pqq biosynthesis probable peptidase, pqqf-like | CK234_01259 | Not Available | Negative | 1661603 - 1662847 | 47349.5 |
| putative peptidyl-prolyl cis-trans isomerase | CK234_01260 | Not Available | Negative | 1662860 - 1663705 | 31477.6 |
| tamb, inner membrane protein subunit of tam complex | CK234_01261 | Not Available | Positive | 1664383 - 1669059 | 173019.0 |
| outer membrane protein assembly complex, yaet protein | CK234_01262 | Not Available | Positive | 1669071 - 1671413 | 88515.9 |
| hypothetical protein | CK234_01263 | Not Available | Positive | 1671548 - 1672459 | 33769.1 |
| btr-like hth-type transcriptional activator | CK234_01264 | Not Available | Negative | 1672564 - 1673466 | 35311.8 |
| putative neutral zinc metallopeptidase | CK234_01265 | Not Available | Positive | 1673678 - 1674358 | 24715.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

