Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trna-specific 2-thiouridylase, mnma-like | CK234_01236 | Not Available | Negative | 1627092 - 1628156 | 39768.7 |
| cysteine synthase | CK234_01237 | Not Available | Negative | 1628163 - 1629113 | 33551.6 |
| endonuclease/exonuclease/phosphatase family protein | CK234_01238 | Not Available | Positive | 1629259 - 1630197 | 34976.7 |
| putative serine/threonine-protein kinase, afsk-like | CK234_01239 | Not Available | Positive | 1630225 - 1632681 | 89645.5 |
| putative atp-dependent rna helicase, rhle-like | CK234_01240 | Not Available | Positive | 1632885 - 1634189 | 48294.5 |
| putative nadp-reducing hydrogenase subunit, hnda-like | CK234_01241 | Not Available | Negative | 1634686 - 1634919 | 8587.81 |
| protein of unknown function (duf1566) | CK234_01242 | Not Available | Negative | 1635234 - 1636787 | 55078.9 |
| arylsulfatase precursor | CK234_01243 | Not Available | Negative | 1637067 - 1638665 | 60901.1 |
| beta-galactosidase | CK234_01244 | Not Available | Negative | 1638780 - 1641485 | 102498.0 |
| beta-n-acetylhexosaminidase | CK234_01245 | Not Available | Negative | 1641521 - 1643602 | 80552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

