Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL10T00C06 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peroxide stress protein, yaaa-like | CK234_01226 | Not Available | Negative | 1616143 - 1616880 | 28260.0 |
| putative thiol-disulfide oxidoreductase, resa-like | CK234_01227 | Not Available | Positive | 1616998 - 1617498 | 19123.4 |
| outer membrane protein beta-barrel family protein | CK234_01228 | Not Available | Positive | 1617519 - 1620323 | 106669.0 |
| carbamoyl-phosphate synthase large chain | CK234_01229 | Not Available | Negative | 1620389 - 1623610 | 119478.0 |
| hypothetical protein | CK234_01230 | Not Available | Negative | 1623865 - 1624656 | 29912.6 |
| tryptophan--trna ligase 2 | CK234_01231 | Not Available | Positive | 1624760 - 1625854 | 41376.8 |
| Trna-val | Not Available | Not Available | Positive | 1626071 - 1626145 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1626184 - 1626261 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1626299 - 1626376 | Not Available |
| putative transcriptional regulatory protein, liar-like | CK234_01235 | Not Available | Positive | 1626451 - 1627095 | 24410.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

